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How to Pay Your Self Assessment Tax Bill (And What to Do If You Can't)

By the AccountingBlogs editorial team17 October 20266 min read
Calculator, notebook and tax paperwork on a desk

Filing your return on time solves only half the January problem — the tax still needs to actually reach HMRC by the payment deadline. Different payment methods clear at different speeds, and choosing one that is still 'processing' on 1 February does not protect you from a late payment penalty.

The main ways to pay

  • Online or telephone banking (Faster Payments): usually same day or next day — the most reliable option close to the deadline.
  • Debit card payment through HMRC's online service: usually same day.
  • CHAPS: usually same working day if sent within your bank's processing times.
  • Bacs, standing order or cheque by post: can take three or more working days, sometimes longer — risky if left until the last week of January.
  • Through your tax code: if you owe less than £3,000 and filed online by 30 December, HMRC can collect it through your PAYE tax code over the following year, provided you already have PAYE income.

Getting the reference right

Payments are matched to your account using your Unique Taxpayer Reference followed by the letter 'K'. Using the wrong reference, or your National Insurance number instead, is one of the most common reasons a payment goes missing or is delayed in being allocated — which can trigger an incorrect late-payment notice even though you paid on time.

If you cannot pay by 31 January

Contact HMRC before the deadline, not after it. HMRC's Time to Pay service lets many taxpayers spread a Self Assessment bill over an agreed number of months. Setting one up before the deadline can avoid the immediate late-payment penalty, though interest still generally accrues on the outstanding balance until it is cleared.

Smoothing future bills

If January regularly feels like a cash-flow shock, HMRC's Budget Payment Plan lets you make regular weekly or monthly payments in advance towards your next bill, rather than facing one lump sum. It is entirely voluntary and can be stopped or adjusted at any time.

Practical next steps

  1. Confirm your exact reference number (your UTR followed by 'K') before making any payment.
  2. Check how long your chosen payment method takes to clear, and pay early enough that it lands by 31 January, not just is sent by then.
  3. If you might struggle to pay, contact HMRC before the deadline rather than after it.
  4. Consider the Budget Payment Plan if you would rather spread next year's bill weekly or monthly.